circRNA basic information
circBase ID: -
Name: hsa_circ_ATRNL1
Synonym: circATRNL1
Host Gene: ATRNL1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005178
MONDO name: osteoarthritis
Disease details: osteoarthritis
Disease DO ID:
8398
Disease MeSH ID:
D010003
Disease NCIt ID:
C3293
Disease ICD11 ID:
558562409
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

human cartilage samples; human articular tissue

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: KLF5
Associated microRNA: miR-153-3p
Biological function: CircATRNL1 protects against OA-associated chondrocyte injury by attenuating IL-1beta-induced chondrocyte apoptosis, inflammatory responses, and extracellular matrix degradation.
Molecular mechanism: CircATRNL1 acts through a ceRNA-like mechanism by targeting miR-153-3p, thereby regulating the miR-153-3p/KLF5 axis in OA chondrocytes.
Biological pathway or process:

apoptosis (inhibits); inflammation (inhibits); ceRNA regulation (other); other pathway/process (inhibits)

Detected method:
Q
M
Validation methods:

Microarray; RNase R Treatment; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; Annexin V/PI Flow Cytometry; Western Blot

Clinical significance:

CircATRNL1 may be a therapeutic target or promising alternative therapy for OA.

Description:

CircATRNL1 is down-regulated in OA cartilage and IL-1beta-treated human chondrocytes. Its overexpression protects chondrocytes by reducing apoptosis, inflammatory responses, and ECM degradation, likely through regulation of the miR-153-3p/KLF5 axis. The study suggests circATRNL1 as a potential therapeutic target for OA.

Confidence score:

0.7291

Other information
Title:

CircATRNL1 protects against osteoarthritis by targeting miR-153-3p and KLF5.

Journal: International immunopharmacology
Published: 2021
PubMed ID: 33971492
Study type:

combined biological and clinical study

Data availability: GSE79258; Supplementary data at https://doi.org/10.1016/j.intimp.2021.107704; datasets available from the corresponding authors upon reasonable requirements
Code availability: -