circRNA basic information
circBase ID: hsa_circ_0080229
Name: hsa_circ_EGFR
Synonym: circ-EGFR
Host Gene: EGFR
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018177
MONDO name: glioblastoma
Disease details: glioblastoma
Disease DO ID:
3068
Disease MeSH ID:
D005909
Disease NCIt ID:
C3058
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

GBM samples; paired adjacent normal brain; cancerous tissues; adjacent NB

Cell lines:

293T; U251; HS683; Hs683; SW1783; NHA; NSCs; U87; U118; 387; 4121; 456; 3691; H2S; BTICs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: EGFR, rtEGFR
Associated microRNA: -
Biological function: circ-EGFR encodes rtEGFR, sustains EGFR activation and membrane localization, promotes BTIC/GBM proliferation, stemness and tumorigenicity, predicts poor prognosis, and its knockdown enhances the anti-GBM effect of nimotuzumab.
Molecular mechanism: circ-EGFR contains an infinite open reading frame that undergoes rolling translation and programmed -1 ribosomal frameshifting to produce rtEGFR; rtEGFR directly binds EGFR, maintains EGFR membrane localization, attenuates EGFR endocytosis, ubiquitination and degradation, and sustains EGFR downstream signaling.
Biological pathway or process:

EGFR (promotes); PI3K/AKT (promotes); ERK (promotes); JAK/STAT (promotes); proliferation (promotes); stemness (promotes); drug resistance (promotes); ubiquitination (inhibits); other pathway/process (promotes)

Detected method:
Q
B
S
Validation methods:

RNase R Treatment; Sanger Sequencing; RNA-seq; Northern Blot; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RT-qPCR; Clinical Sample Validation; IF (Immunofluorescence); Co-IP; Transfection; CCK8; Colony Formation Assay; In Vivo Animal Model; H&E Staining; Western Blot; Survival Analysis; Bioinformatics Analysis

Clinical significance:

circ-EGFR levels correlated with the EGFR signature and predicted poor prognosis of GBM patients; targeting rtEGFR may improve EGFR-targeting therapies in GBM.

Description:

circ-EGFR is up-regulated in GBM/BTICs and is derived from exons 14 and 15 of EGFR. It encodes the rolling-translated protein rtEGFR, which binds EGFR, preserves EGFR membrane localization, reduces EGFR endocytosis/ubiquitination/degradation, and sustains EGFR downstream signaling. High circ-EGFR predicts poor overall survival in GBM patients, while circ-EGFR knockdown reduces tumorigenicity and sensitizes tumors to nimotuzumab.

Confidence score:

0.83

Other information
Title:

Rolling-translated EGFR variants sustain EGFR signaling and promote glioblastoma tumorigenicity.

Journal: Neuro-oncology
Published: 2021
PubMed ID: 33325513
Study type:

combined biological and clinical study

Data availability: NCBI SRA: PRJNA525736
Code availability: -