circRNA basic information
circBase ID: hsa_circ_0001136
Name: hsa_circ_ASXL1
Synonym: circASXL1
Host Gene: ASXL1
Genomic location(hg19): chr20:30954186-30956926:+
Genomic location(hg38): chr20:32366383-32369123:+
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005029
MONDO name: essential thrombocythemia
Disease details: essential thrombocythemia
Disease DO ID:
2224
Disease MeSH ID:
D013920
Disease NCIt ID:
C3407
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow tissues; bone marrow-derived exosomes

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: c-Met, WNT, PI3K, TGF-beta
Associated microRNA: miR-34b-5p, miR-29a-5p, miR-223a-3p, miR-876-3p, miR-215-3p
Biological function: Down-regulated in bone marrow-derived exosomes from ET patients; predicted to regulate cell proliferation and apoptosis through miRNA-mediated targeting of functional genes and signaling pathways.
Molecular mechanism: Predicted circRNA-miRNA-mRNA ceRNA network in which circASXL1 targets miR-34b-5p and other miRNAs, with downstream regulation of c-Met, WNT, PI3K and TGF-beta signaling components.
Biological pathway or process:

ceRNA regulation (other); proliferation (other); apoptosis (other); Wnt/beta-catenin (other); PI3K/AKT (other); TGF-beta/SMAD (other); other pathway/process (other)

Detected method:
Q
S
Validation methods:

circRNA-seq; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

Potential basis for circRNA-based ET diagnosis and treatment.

Description:

hsa_circ_0001136/circASXL1 is down-regulated in bone marrow-derived exosomes from ET patients and was validated by Sanger sequencing, divergent-primer RT-PCR, and qRT-PCR. Bioinformatics analysis predicts that circASXL1 may regulate ET-related proliferation and apoptosis programs through miR-34b-5p and other miRNAs targeting c-Met, WNT, PI3K, and TGF-beta pathways.

Confidence score:

0.5841

Other information
Title:

Differential expression of circular RNAs in bone marrow-derived exosomes from essential thrombocythemia patients.

Journal: Cell biology international
Published: 2021
PubMed ID: 33325145
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -