circRNA basic information
circBase ID: hsa_circ_0109500
Name: hsa_circ_ZNF566
Synonym: -
Host Gene: ZNF566
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal liver tissues

Cell lines:

Lo2; Huh7; QSG-7701; Hep3B; HepG2; MHCC-97L; MHCC97H; MHCC-LM3; LM3

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TDO2, AGO2
Associated microRNA: miR-4738-3p
Biological function: promotes HCC cell migration, invasion, and proliferation; promotes tumorigenesis and metastasis
Molecular mechanism: acts as a miR-4738-3p sponge to relieve repression of TDO2 (ceRNA mechanism)
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Sanger Sequencing; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis; Western Blot

Clinical significance:

High circZNF566 expression in HCC tissues was positively correlated with clinicopathological features and poor prognosis; may serve as a novel diagnostic marker and prognostic indicator

Description:

circZNF566 is up-regulated in HCC and promotes proliferation, migration, invasion, tumorigenesis and metastasis. It functions mainly as a ceRNA by sponging miR-4738-3p, thereby relieving repression of TDO2 and driving HCC progression; high circZNF566 is associated with poorer survival.

Confidence score:

0.8921

Other information
Title:

Circular RNA circZNF566 promotes hepatocellular carcinoma progression by sponging miR-4738-3p and regulating TDO2 expression.

Journal: Cell death & disease
Published: 2020
PubMed ID: 32532962
Study type:

combined biological and clinical study

Data availability: The data that support the findings of this study are available from the corresponding author upon reasonable request.
Code availability: -