circRNA basic information
circBase ID: -
Name: hsa_circ_ZRANB1
Synonym: circZRANB1
Host Gene: ZRANB1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0002406
MONDO name: dermatitis
Disease details: atopic dermatitis
Disease DO ID:
2723
Disease MeSH ID:
D003872
Disease NCIt ID:
C2983
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

lesional skin; non-lesional skin; healthy skin; skin biopsies

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: circZRANB1 is upregulated in psoriasis lesional skin and showed potential as a diagnostic biomarker for discriminating psoriasis from AD.
Molecular mechanism: circZRANB1 was upregulated independently of the linear transcript in psoriasis; no functional molecular mechanism was experimentally established.
Biological pathway or process:

other pathway/process (other)

Detected method:
S
Validation methods:

RNA-seq; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circZRANB1 showed strong potential as a diagnostic biomarker for classifying psoriasis lesional skin and AD lesional skin, with an area under the curve of 0.89.

Description:

circZRANB1 was identified as an upregulated circRNA in psoriasis lesional skin and was more abundant in psoriasis lesional skin than AD lesional skin. It showed strong diagnostic biomarker potential for distinguishing psoriasis from AD, while Sanger sequencing confirmed its back-splicing junction and circularity.

Confidence score:

0.6238

Other information
Title:

Characterization of circular RNA transcriptomes in psoriasis and atopic dermatitis reveals disease-specific expression profiles.

Journal: Experimental dermatology
Published: 2021
PubMed ID: 33113213
Study type:

combined bioinformatics and clinical study

Data availability: GSE121212; https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE121212
Code availability: -