circRNA basic information
circBase ID: -
Name: hsa_circ_RHOT1
Synonym: hsa_circRNA_102034
Host Gene: RHOT1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal tissues / peritumor tissues

Cell lines:

Hep3B; Huh7; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TIP60, NR2F6
Associated microRNA: -
Biological function: promotes HCC growth and metastasis; promotes proliferation, migration and invasion; promotes survival and inhibits apoptosis
Molecular mechanism: circRHOT1 recruits TIP60 to the NR2F6 promoter to initiate NR2F6 transcription (NuA4 complex-related chromatin regulation).
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); apoptosis (inhibits); Notch (inhibits)

Detected method:
Q
B
H
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Northern Blot; ISH (In Situ Hybridization); FISH / smFISH; Back-Splice Junction PCR / divergent primers PCR; RNA-seq; Transfection; CCK8; Colony Formation Assay; EdU Staining; Transwell Assay; Annexin V/PI Flow Cytometry; RIP (RNA Immunoprecipitation); RNA Pull-Down; ChIP / ChIP-seq; Western Blot; In Vivo Animal Model; Survival Analysis; Nuclear-Cytoplasmic Fractionation

Clinical significance:

high circRHOT1 expression predicts poor prognosis in HCC patients

Description:

circRHOT1 is up-regulated in HCC tissues and its high level is associated with poor prognosis. Functionally, it promotes HCC cell proliferation, migration/invasion, tumor growth and metastasis, partly by recruiting TIP60 to the NR2F6 promoter to activate NR2F6 transcription, with reported involvement of NOTCH2 signaling downstream.

Confidence score:

0.8129

Other information
Title:

Circular RNA circRHOT1 promotes hepatocellular carcinoma progression by initiation of NR2F6 expression.

Journal: Molecular cancer
Published: 2019
PubMed ID: 31324186
Study type:

combined biological and clinical study

Data availability: GSE94508; GSE97332; GSE36376; GSE25097; SRP165820; GSE121468
Code availability: -