circRNA basic information
circBase ID: hsa_circ_0072391
Name: hsa_circ_HMGCS1
Synonym: -
Host Gene: HMGCS1
Genomic location(hg19): chr5:43295853-43297268:-
Genomic location(hg38): chr5:43295751-43297166:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005047
MONDO name: infertility disorder
Disease details: endometriosis-associated infertility
Disease DO ID:
5223
Disease MeSH ID:
D007246
Disease NCIt ID:
C3836
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

cumulus cells / CCs

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TGFBR1, HMGB1, HMGCS1
Associated microRNA: let-7a-5p, let-7c-5p, let-7g-5p, let-7i-5p, hsa-miR-129-5p
Biological function: May be involved in cumulus cell proliferation and apoptosis and abnormal follicular development in endometriosis-associated infertility.
Molecular mechanism: Predicted ceRNA mechanism through let-7g-5p/TGFBR1 and miR-129-5p/HMGB1 axes.
Biological pathway or process:

ceRNA regulation (other); proliferation (other); apoptosis (other); other pathway/process (other)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; circRNA-seq; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

Potential diagnostic and therapeutic target for endometriosis-associated infertility.

Description:

hsa_circ_0072391 was up-regulated in cumulus cells from endometriosis-associated infertility patients and validated by qRT-PCR. The study predicts that it may regulate cumulus cell proliferation and apoptosis through ceRNA axes involving let-7g-5p/TGFBR1 or miR-129-5p/HMGB1.

Confidence score:

0.5994

Other information
Title:

Circular RNA expression profiling and bioinformatic analysis of cumulus cells in endometriosis infertility patients.

Journal: Epigenomics
Published: 2020
PubMed ID: 33090019
Study type:

combined biological and clinical study

Data availability: Supplementary data at www.futuremedicine.com/doi/sup pl/10.2217/epi-2020-0291
Code availability: -