circRNA basic information
circBase ID: -
Name: hsa_circ_FAT1
Synonym: circRNA FAT1
Host Gene: FAT1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005076
MONDO name: periodontitis
Disease details: periodontitis
Disease DO ID:
824, 9893
Disease MeSH ID:
D010518
Disease NCIt ID:
C34918
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

periodontal ligament tissue; cranial tissue

Cell lines:

PDLSCs; HEK-293 T

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UN
Associated gene: SMAD5
Associated microRNA: miR-4781-3p
Biological function: promotes osteogenic/osteoblastic differentiation of PDLSCs and periodontal bone regeneration; does not significantly affect PDLSC proliferation
Molecular mechanism: ceRNA/miRNA sponge mechanism: circFAT1 sponges miR-4781-3p to regulate SMAD5
Biological pathway or process:

ceRNA regulation (promotes); proliferation (other); osteogenesis (other pathway/process) (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Luciferase Reporter Assay; Transfection; Western Blot; EdU; CCK8; In Vivo Animal Model; H&E Staining

Clinical significance:

potential target for PDLSCs-mediated periodontal bone regeneration

Description:

circFAT1 promotes osteogenic/osteoblastic differentiation of human PDLSCs and supports bone regeneration, mainly by acting as a miRNA sponge for miR-4781-3p to relieve repression of SMAD5. circFAT1 is predominantly localized in the cytoplasm and does not significantly affect PDLSC proliferation.

Confidence score:

0.589

Other information
Title:

CircRNA FAT1 Regulates Osteoblastic Differentiation of Periodontal Ligament Stem Cells via miR-4781-3p/SMAD5 Pathway.

Journal: Stem cells international
Published: 2021
PubMed ID: 35003269
Study type:

combined biological and clinical study

Data availability: The raw data used to support the findings of this study are available from the corresponding author upon request.
Code availability: -