circRNA basic information
circBase ID: -
Name: hsa_circ_ATRNL1
Synonym: hsa-circ-0020093
Host Gene: ATRNL1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005133
MONDO name: endometriosis
Disease details: endometriosis
Disease DO ID:
289
Disease MeSH ID:
D004715
Disease NCIt ID:
C3014
Disease ICD11 ID:
1838213761
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ectopic endometrium (EcEM); eutopic endometrium (EuEM); cyst walls of ovarian endometriomas

Cell lines:

Ishikawa; HEK-293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: Yes-associated protein 1 (YAP1)
Associated microRNA: miR-141-3p, miR-200a-3p
Biological function: promotes proliferation, migration, and invasion; promotes EMT progression in endometriosis in vitro
Molecular mechanism: circATRNL1 acts as a ceRNA to sponge miR-141-3p and miR-200a-3p, thereby upregulating YAP1 and promoting EMT
Biological pathway or process:

EMT (promotes); proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Transfection; CCK8; Transwell Assay; Western Blot; IHC (Immunohistochemistry); Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

-

Description:

circATRNL1 is up-regulated in ectopic endometriotic tissues and mainly localizes to the cytoplasm in Ishikawa cells. It promotes proliferation, migration, invasion and EMT by acting as a ceRNA that sponges miR-141-3p and miR-200a-3p to upregulate YAP1 in vitro.

Confidence score:

0.7325

Other information
Title:

CircATRNL1 promotes epithelial-mesenchymal transition in endometriosis by upregulating Yes-associated protein 1 in vitro.

Journal: Cell death & disease
Published: 2020
PubMed ID: 32728069
Study type:

combined biological and clinical study

Data availability: Supplementary Information accompanies this paper at (10.1038/s41419-020-02784-4).
Code availability: -