circRNA basic information
circBase ID: hsa_circ_0000442
Name: hsa_circ_MED13L
Synonym: circ_0000442
Host Gene: MED13L
Genomic location(hg19): chr12:116668237-116675510:-
Genomic location(hg38): chr12:116230432-116237705:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast tumor tissues; adjacent normal tissues

Cell lines:

MCF-10A; MCF-7; T47D; BT474; SK-BR-3; MDA-MB-231; SUM-1315

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: PTEN, PI3K, Akt
Associated microRNA: miR-148b-3p
Biological function: circ_0000442 functions as a tumor suppressor in breast cancer, reducing cell viability and colony formation, inducing G1 arrest, and suppressing tumor growth.
Molecular mechanism: circ_0000442 acts as a sponge of miR-148b-3p, blocks miR-148b-3p targeting of PTEN, increases PTEN, and inhibits PI3K/Akt signaling.
Biological pathway or process:

PI3K/AKT (inhibits); proliferation (inhibits); cell cycle (other); ceRNA regulation (promotes); other pathway/process (inhibits)

Detected method:
Q
S
Validation methods:

RT-qPCR; RNA-seq; Bioinformatics Analysis; Transfection; Colony Formation Assay; Cell Cycle Assay; Luciferase Reporter Assay; RNA Pull-Down; Western Blot; In Vivo Animal Model

Clinical significance:

Circ_0000442 hold the promise of being developed as a novel biomarker of breast cancer.

Description:

hsa_circ_0000442/circ_0000442 is down-regulated in breast cancer tissues and cell lines. It acts as a tumor suppressor by sponging miR-148b-3p, thereby relieving miR-148b-3p-mediated repression of PTEN and inhibiting PI3K/Akt signaling, which reduces proliferation, colony formation, and xenograft tumor growth.

Confidence score:

0.657

Other information
Title:

Circular RNA Circ_0000442 acts as a sponge of MiR-148b-3p to suppress breast cancer via PTEN/PI3K/Akt signaling pathway.

Journal: Gene
Published: 2021
PubMed ID: 32891771
Study type:

combined biological and clinical study

Data availability: GSE101124; Supplementary data at https:// doi.org/10.1016/j.gene.2020.145113; data available from the corresponding author upon request
Code availability: -