circRNA basic information
circBase ID: -
Name: hsa_circ_SLC8A1
Synonym: circ-SLC8A1
Host Gene: SLC8A1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005298
MONDO name: osteoporosis
Disease details: osteoporosis
Disease DO ID:
11476
Disease MeSH ID:
D010024
Disease NCIt ID:
C3298
Disease ICD11 ID:
2113001430
Disease OMIM ID:
166710
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow; bone tissues

Cell lines:

293T

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: AKAP2
Associated microRNA: miR-516b-5p
Biological function: Circ-SLC8A1 promotes osteoporosis progression in BMSCs, enhances mineralized nodule formation and calcium deposits, and activates osteoporosis-related osteogenic markers including ALP, BMP4, SPP1 and BGLAP.
Molecular mechanism: Circ-SLC8A1 functions as a ceRNA that sponges miR-516b-5p, thereby relieving the inhibitory effect of miR-516b-5p on AKAP2 expression and modulating osteoporosis progression.
Biological pathway or process:

ceRNA regulation (promotes); other pathway/process (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

circ-SLC8A1 may function as a novel biomarker in treating osteoporosis.

Description:

Circ-SLC8A1 is up-regulated in the OVX osteoporosis model and OVX-derived BMSCs. It promotes osteoporosis-related cellular phenotypes by acting as a cytoplasmic ceRNA that binds miR-516b-5p and increases AKAP2 expression, forming the circ-SLC8A1/miR-516b-5p/AKAP2 regulatory axis.

Confidence score:

0.7549

Other information
Title:

Circ-SLC8A1 regulates osteoporosis through blocking the inhibitory effect of miR-516b-5p on AKAP2 expression.

Journal: The journal of gene medicine
Published: 2020
PubMed ID: 32830397
Study type:

biological research

Data availability: Experimental data can be obtained from the corresponding author upon reasonable request.
Code availability: -