circRNA basic information
circBase ID: -
Name: hsa_circ_SOX5
Synonym: circ-SOX5
Host Gene: SOX5
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; serum

Cell lines:

THLE-2; HepG2; HCCLM3

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: synoviolin 1 (SYVN1)
Associated microRNA: miR-502-5p
Biological function: promotes proliferation and cell viability, migration and invasion; inhibits apoptosis in hepatocellular carcinoma cells
Molecular mechanism: circ-SOX5 acts as a miRNA sponge for miR-502-5p, thereby upregulating SYVN1
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; Western Blot; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

circ-SOX5 may be a potential biomarker of HCC

Description:

circ-SOX5 is up-regulated in HCC tissues/serum and HCC cell lines. It promotes HCC cell proliferation/viability and migration/invasion while inhibiting apoptosis via a ceRNA mechanism by sponging miR-502-5p and upregulating SYVN1.

Confidence score:

0.8122

Other information
Title:

Circular RNA SOX5 promotes the proliferation and inhibits the apoptosis of the hepatocellular carcinoma cells by targeting miR-502-5p/synoviolin 1 axis.

Journal: Bioengineered
Published: 2022
PubMed ID: 35048790
Study type:

combined biological and clinical study

Data availability: GSE155949
Code availability: -