circRNA basic information
circBase ID: hsa_circ_0002623
Name: hsa_circ_VANGL1
Synonym: circ_0002623
Host Gene: VANGL1
Genomic location(hg19): chr1:116202261-116206889:+
Genomic location(hg38): chr1:115659640-115664268:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BCa tissues; paracancerous tissues

Cell lines:

J82; RT4; T24; 5637; HT-1376; SV-HUC-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SMAD2, TGF-beta, WNT1
Associated microRNA: miR-1276
Biological function: promotes bladder cancer cell proliferation, migration, cell cycle progression, tumor growth and lung metastasis
Molecular mechanism: ceRNA mechanism: circ_0002623 sponges miR-1276 to upregulate SMAD2, affecting TGF-beta and WNT1 expression
Biological pathway or process:

proliferation (promotes); migration (promotes); cell cycle (promotes); metastasis (promotes); TGF-beta/SMAD (promotes); Wnt/beta-catenin (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; Sanger Sequencing; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; BrdU; Transwell Assay; Cell Cycle Assay; Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; H&E Staining; Survival Analysis

Clinical significance:

high circ_0002623 expression was positively correlated with lymph node metastasis and associated with shorter overall survival of BCa patients

Description:

circ_0002623 is upregulated in bladder cancer and acts as an oncogenic circRNA. It mainly localizes to the cytoplasm and promotes proliferation, migration, cell-cycle progression and in vivo tumor growth/metastasis by sponging miR-1276 to increase SMAD2, thereby enhancing TGF-beta and Wnt-related signaling (e.g., WNT1). High circ_0002623 expression correlates with lymph node metastasis and poorer overall survival.

Confidence score:

0.84

Other information
Title:

Circ_0002623 promotes bladder cancer progression by regulating the miR-1276/SMAD2 axis.

Journal: Cancer science
Published: 2022
PubMed ID: 35048477
Study type:

combined biological and clinical study

Data availability: GSE92675; The data used to support the findings of this study are available from the corresponding author upon request.
Code availability: -