circRNA basic information
circBase ID: -
Name: hsa_circ_CDR1AS
Synonym: ciRS-7
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004975
MONDO name: Alzheimer disease
Disease details: Alzheimer’s disease
Disease DO ID:
10652
Disease MeSH ID:
D000544
Disease NCIt ID:
C2866
Disease ICD11 ID:
1611724421
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

neocortex (Brodmann A22); hippocampal CA1; temporal lobe; brain stem

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: UBE2A
Associated microRNA: miRNA-7
Biological function: Acts as an endogenous miRNA-7 sponge; its deficiency is associated with increased ambient miRNA-7 and reduced expression of miRNA-7-sensitive targets (e.g., UBE2A), potentially impairing ubiquitin-proteasome-mediated amyloid clearance in sporadic AD brain.
Molecular mechanism: ciRS-7 functions as a competing endogenous RNA (ceRNA) sponge for miRNA-7, modulating miRNA-7 availability and thereby affecting miRNA-7-targeted mRNAs such as UBE2A.
Biological pathway or process:

ceRNA regulation (promotes); other pathway/process (other)

Detected method:
B
Validation methods:

RNase R Treatment; Northern Blot; Clinical Sample Validation

Clinical significance:

ciRS-7 is significantly reduced in sporadic AD neocortex (Brodmann A22) and hippocampal CA1, as part of a misregulated ciRS-7-miRNA-7-UBE2A circuit.

Description:

In sporadic Alzheimer’s disease brain (neocortex A22 and hippocampal CA1), ciRS-7 is markedly down-regulated. Loss of this miRNA-7 sponge is linked to increased ambient miRNA-7 and reduced expression of miRNA-7-sensitive targets such as UBE2A, implicating a disrupted circRNA/miRNA/mRNA regulatory circuit relevant to AD pathology.

Confidence score:

0.429

Other information
Title:

Deficiency in the Ubiquitin Conjugating Enzyme UBE2A in Alzheimer's Disease (AD) is Linked to Deficits in a Natural Circular miRNA-7 Sponge (circRNA; ciRS-7).

Journal: Genes
Published: 2016
PubMed ID: 27929395
Study type:

combined biological and clinical study

Data availability: -
Code availability: -