circRNA basic information
circBase ID: -
Name: hsa_circ_CNOT2
Synonym: circCNOT2
Host Gene: CNOT2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissue; adjacent normal tissue

Cell lines:

MCF-10A; MCF-7; SKBR-3

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TWIST1
Associated microRNA: miR-409-3p
Biological function: Promotes proliferation, invasion, migration and EMT and inhibits apoptosis in breast cancer cells; circCNOT2 knockdown shows the opposite effects.
Molecular mechanism: Acts as a competing endogenous RNA (miRNA sponge) for miR-409-3p to derepress/mediate TWIST1 expression.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis; Luciferase Reporter Assay; RNA Pull-Down; Transfection; MTT; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot

Clinical significance:

Elevated circCNOT2 is associated with poor prognosis of BC.

Description:

circCNOT2 is up-regulated in breast cancer tissues/cells and correlates with worse survival. Functionally, circCNOT2 promotes proliferation, invasion, migration and EMT while inhibiting apoptosis in BC cells. Mechanistically, circCNOT2 acts as a ceRNA sponging miR-409-3p to increase TWIST1 expression (circCNOT2/miR-409-3p/TWIST1 axis).

Confidence score:

0.7537

Other information
Title:

Circular RNA CNOT2 knockdown regulates twist family BHLH transcription factor via targeting microRNA 409-3p to prevent breast cancer invasion, migration and epithelial-mesenchymal transition.

Journal: Bioengineered
Published: 2021
PubMed ID: 34698000
Study type:

combined biological and clinical study

Data availability: -
Code availability: -