circRNA basic information
circBase ID: -
Name: hsa_circ_SLC34A2-ROS1
Synonym: F-circSR2
Host Gene: SLC34A2-ROS1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

HCC78; HEK293T; H1299; A549

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UN
Associated gene: -
Associated microRNA: miR-150-5p, miR-194-3p, miR-515-5p
Biological function: promotes cell migration; little effect on cell proliferation
Molecular mechanism: may act as miRNA sponge (predicted binding sites for miR-150-5p, miR-194-3p and miR-515-5p)
Biological pathway or process:

migration (promotes); proliferation (other); ceRNA regulation (other)

Detected method:
Q
Validation methods:

divergent primers PCR; RNase R Treatment; Sanger Sequencing; Transfection; Transwell Assay; Wound Healing Assay; MTT; Colony Formation Assay; Bioinformatics Analysis; RT-PCR

Clinical significance:

-

Description:

In NSCLC cell models, F-circSR2 (generated from the SLC34A2-ROS1 fusion gene) promotes cell migration while having little effect on proliferation. A potential miRNA-sponge mechanism was proposed based on bioinformatic prediction of miRNA binding sites, without direct functional validation.

Confidence score:

0.6562

Other information
Title:

Circular RNA F-circSR derived from SLC34A2-ROS1 fusion gene promotes cell migration in non-small cell lung cancer.

Journal: Molecular cancer
Published: 2019
PubMed ID: 31118036
Study type:

biological research

Data availability: -
Code availability: -