circRNA basic information
circBase ID: -
Name: hsa_circ_PTPRA
Synonym: circ_PTPRA
Host Gene: PTPRA
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum; serum-derived exosomes; serumal exosomes; tumor tissues

Cell lines:

HCT116; DLD1; NCM460

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: SMAD4
Associated microRNA: miR-671-5p
Biological function: Exosomal circ_PTPRA induces CRC cell cycle arrest, inhibits CRC cell proliferation and tumor growth, promotes radiosensitivity, decreases colony formation, and increases apoptosis after radiation.
Molecular mechanism: circ_PTPRA functions as a ceRNA/miRNA sponge for miR-671-5p, thereby increasing SMAD4 expression and inhibiting CRC growth and radioresistance.
Biological pathway or process:

ceRNA regulation (other); proliferation (inhibits); cell cycle (inhibits); apoptosis (promotes); radioresistance (inhibits)

Detected method:
Q
S
Validation methods:

circRNA-seq; RT-qPCR; RNase R Treatment; Clinical Sample Validation; Bioinformatics Analysis; Transfection; MTT; Cell Cycle Assay; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; Luciferase Reporter Assay; In Vivo Animal Model

Clinical significance:

Exosomal circ_PTPRA might be used as a potential predicted and therapeutic target or promising biomarker for CRC diagnosis, treatment and prognosis.

Description:

circ_PTPRA is downregulated in serum-derived exosomes from CRC patients and in CRC cell lines. Exosomal circ_PTPRA suppresses CRC cell proliferation and tumor growth and enhances radiosensitivity by sponging miR-671-5p to increase SMAD4 expression. The study suggests exosomal circ_PTPRA may serve as a CRC biomarker and therapeutic target.

Confidence score:

0.7595

Other information
Title:

Exosomal circ_PTPRA inhibits tumorigenesis and promotes radiosensitivity in colorectal cancer by enriching the level of SMAD4 via competitively binding to miR-671-5p.

Journal: Cytotechnology
Published: 2022
PubMed ID: 35185285
Study type:

combined biological and clinical study

Data availability: GSE149200; Data analyzed for this study will be available on a reasonable request.
Code availability: -