circRNA basic information
circBase ID: hsa_circ_0001400
Name: hsa_circ_RELL1
Synonym: circRELL1
Host Gene: RELL1
Genomic location(hg19): chr4:37633006-37640126:-
Genomic location(hg38): chr4:37631384-37638504:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissue; adjacent non-cancer tissues; plasma exosomes

Cell lines:

AGS; SGC-7901; MKN45; MGC823; GES-1; HEK-293

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: EPHB3, Ago2
Associated microRNA: miR-637
Biological function: suppresses GC cell proliferation, migration, invasion and anti-apoptosis; inhibits tumor growth and metastasis
Molecular mechanism: Exosomal circRELL1 functions as a ceRNA by sponging miR-637, thereby upregulating EPHB3 and modulating autophagy activation in gastric cancer.
Biological pathway or process:

autophagy (inhibits); proliferation (inhibits); apoptosis (promotes); migration (inhibits); invasion (inhibits); metastasis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; Clinical Sample Validation; Survival Analysis; ROC Analysis; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Annexin V/PI Flow Cytometry; TUNEL; Western Blot; IHC (Immunohistochemistry); IF (Immunofluorescence); In Vivo Animal Model; H&E Staining

Clinical significance:

Decreased circRELL1 is associated with advanced TNM stage, lymph node metastasis and poor prognosis; plasma exosomal circRELL1 may serve as a circulating biomarker for GC diagnosis.

Description:

circRELL1 (hsa_circ_0001400), derived from the RELL1 gene, is down-regulated in gastric cancer tissues and plasma exosomes and is associated with adverse clinicopathological features. Functionally, circRELL1 and exosomal circRELL1 suppress GC proliferation, migration/invasion, tumor growth and metastasis by acting as a ceRNA sponge for miR-637 to increase EPHB3 and modulate autophagy activity, supporting its potential as a circulating diagnostic/prognostic biomarker and therapeutic target.

Confidence score:

0.8942

Other information
Title:

Exosomal circRELL1 serves as a miR-637 sponge to modulate gastric cancer progression via regulating autophagy activation.

Journal: Cell death & disease
Published: 2022
PubMed ID: 35027539
Study type:

combined biological and clinical study

Data availability: GSE 100170; TCGA-STAD.htseq_fpkm-uq.tsv; TCGA-STAD.mirna.tsv
Code availability: -