circRNA basic information
circBase ID: hsa_circ_0000847
Name: hsa_circ_SMAD2
Synonym: -
Host Gene: SMAD2
Genomic location(hg19): chr18:45391429-45423180:-
Genomic location(hg38): chr18:47865058-47896809:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent non-tumor tissues

Cell lines:

HepG2; HCCLM9; HCCLM3; MHCC97L; L02

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: miR-629
Biological function: Inhibits migration, invasion, and epithelial-mesenchymal transition (EMT) in hepatocellular carcinoma cells.
Molecular mechanism: Acts as an miRNA sponge/target for miR-629; suppresses miR-629 expression, and miR-629 mimics reverse circSMAD2-mediated inhibition of migration, invasion and EMT.
Biological pathway or process:

EMT (inhibits); migration (inhibits); invasion (inhibits); ceRNA regulation (other)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; Transwell Assay; Western Blot; CCK8; Annexin V/PI Flow Cytometry

Clinical significance:

circSMAD2 expression was associated with the differentiation degree of the HCC tissues (lower in poorly differentiated tissues).

Description:

circSMAD2 is down-regulated in hepatocellular carcinoma tissues and HCC cell lines. Functionally, circSMAD2 suppresses migration, invasion and EMT in HCC cells by binding/negatively regulating miR-629, and miR-629 overexpression reverses these inhibitory effects.

Confidence score:

0.7581

Other information
Title:

circSMAD2 inhibits the epithelial-mesenchymal transition by targeting miR-629 in hepatocellular carcinoma.

Journal: OncoTargets and therapy
Published: 2018
PubMed ID: 29844683
Study type:

combined biological and clinical study

Data availability: -
Code availability: -