circRNA basic information
circBase ID: hsa_circ_0002768
Name: hsa_circ_MYLK
Synonym: circMYLK
Host Gene: MYLK
Genomic location(hg19): chr3:123471177-123512691:-
Genomic location(hg38): chr3:123752330-123793844:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent non-tumor tissues

Cell lines:

MHCC-97H; HCC-LM3; HL-7702; HepG2; PLC; HEK-293T; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: KMT5C
Associated microRNA: miR-29a
Biological function: promotes HCC cell proliferation, migration and invasion; inhibits apoptosis; promotes xenograft tumor growth and lung metastasis in vivo
Molecular mechanism: ceRNA mechanism: circMYLK sponges miR-29a to relieve repression of KMT5C
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); metastasis (promotes)

Detected method:
Q
H
Validation methods:

RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Wound Healing Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Western Blot; IF (Immunofluorescence); IHC (Immunohistochemistry); H&E Staining; In Vivo Animal Model; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

elevated circMYLK expression was related to poor overall survival rate in HCC patients; associated with tumor size, differentiation, and TNM classification

Description:

circMYLK (hsa_circ_0002768) is up-regulated in HCC tissues and cell lines and predicts worse overall survival. It promotes HCC proliferation, migration/invasion, and metastasis while inhibiting apoptosis by sponging miR-29a to increase KMT5C expression.

Confidence score:

0.7739

Other information
Title:

Circular RNA MYLK Promotes Hepatocellular Carcinoma Progression Through the miR29a/KMT5C Signaling Pathway.

Journal: OncoTargets and therapy
Published: 2020
PubMed ID: 32904604
Study type:

combined biological and clinical study

Data availability: -
Code availability: -