circRNA basic information
circBase ID: hsa_circ_0006282
Name: hsa_circ_TCEB1
Synonym: circ_0006282
Host Gene: TCEB1
Genomic location(hg19): chr8:74868145-74872053:-
Genomic location(hg38): chr8:73955910-73959818:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissue; adjacent non-tumor tissue

Cell lines:

AGS; HGC-27; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: YWHAB
Associated microRNA: miR-144-5p
Biological function: promotes proliferation, colony formation, migration and invasion/metastasis; promotes tumor growth in vivo
Molecular mechanism: ceRNA sponge mechanism: circ_0006282 sponges miR-144-5p to upregulate YWHAB
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

-

Description:

circ_0006282 is upregulated in gastric cancer tissues and cell lines, mainly localized in the cytoplasm, and promotes GC cell proliferation and metastatic phenotypes. Mechanistically, it acts as a ceRNA by sponging miR-144-5p to increase YWHAB expression; knockdown suppresses tumor growth in a nude mouse xenograft model.

Confidence score:

0.7827

Other information
Title:

Circular RNA Circ_0006282 Promotes Cell Proliferation and Metastasis in Gastric Cancer by Regulating MicroRNA-144-5p/Tyrosine 3-Monooxygenase/Tryptophan 5-Monooxygenase Activation Protein beta Axis.

Journal: Cancer management and research
Published: 2021
PubMed ID: 33536789
Study type:

combined biological and clinical study

Data availability: -
Code availability: -