circRNA basic information
circBase ID: -
Name: hsa_circ_LDLR
Synonym: circRNA-102450
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004958
MONDO name: oral cavity squamous cell carcinoma
Disease details: oral squamous cell carcinoma
Disease DO ID:
0050866
Disease MeSH ID:
-
Disease NCIt ID:
C4833
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma

Cell lines:

HSC-3; Sa3; SAS; HNOKs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: miR-1178
Biological function: Inhibits OSCC metastatic properties including proliferation, migration, and invasion; associated with absence of regional lymph node metastasis.
Molecular mechanism: circRNA-102450 binds miR-1178 and down-regulates it (miRNA sponge/negative regulation).
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RT-ddPCR; divergent primers PCR; RNase R Treatment; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Luciferase Reporter Assay; Transfection; Transwell Assay; Wound Healing Assay; Cohort Study

Clinical significance:

High circRNA-102450 in preoperative plasma liquid biopsy was associated with no regional lymph node metastasis; proposed as a potential biomarker predicting RLNM in OSCC.

Description:

circRNA-102450 is down-regulated in OSCC cells and acts as a tumor suppressor. Its overexpression inhibits proliferation, migration and invasion, and it directly binds to and down-regulates miR-1178. In preoperative plasma liquid biopsy, low circRNA-102450 is associated with regional lymph node metastasis, supporting its potential diagnostic value for RLNM prediction.

Confidence score:

0.8347

Other information
Title:

Tumor Suppressive Circular RNA-102450: Development of a Novel Diagnostic Procedure for Lymph Node Metastasis from Oral Cancer.

Journal: Cancers
Published: 2021
PubMed ID: 34830863
Study type:

combined biological and clinical study

Data availability: GSE145608
Code availability: -