circRNA basic information
circBase ID: -
Name: hsa_circ_SETDB1
Synonym: -
Host Gene: SETDB1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005211
MONDO name: ovarian serous adenocarcinoma
Disease details: serous ovarian cancer
Disease DO ID:
0050933, 5744
Disease MeSH ID:
-
Disease NCIt ID:
C7550
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

SOC tissues; fallopian tube tissues; neoplasms; peritoneal nodules

Cell lines:

A2780; SKOV3; IOSE-80; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MAP3K3, Ago2
Associated microRNA: miR-129-3p
Biological function: promotes proliferation, invasion and migration; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: circSETDB1 acts as a sponge for miR-129-3p to upregulate MAP3K3 (ceRNA-like regulation).
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Actinomycin D / DRB Stability Assay; Clinical Sample Validation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry)

Clinical significance:

-

Description:

circSETDB1 is up-regulated in serous ovarian cancer and functions as an oncogenic circRNA. It sponges miR-129-3p to increase MAP3K3 expression, thereby promoting proliferation, migration and invasion and inhibiting apoptosis; circSETDB1 knockdown suppresses tumor growth in vivo.

Confidence score:

0.8006

Other information
Title:

CircSETDB1 knockdown inhibits the malignant progression of serous ovarian cancer through miR-129-3p-dependent regulation of MAP3K3.

Journal: Journal of ovarian research
Published: 2021
PubMed ID: 34789310
Study type:

combined biological and clinical study

Data availability: The online version contains supplementary material available at 10.1186/s13048-021-00875-0; The analyzed data sets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -