circRNA basic information
circBase ID: hsa_circ_0138959
Name: hsa_circ_GDA
Synonym: circ_0138959
Host Gene: GDA
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005076
MONDO name: periodontitis
Disease details: periodontitis
Disease DO ID:
824, 9893
Disease MeSH ID:
D010518
Disease NCIt ID:
C34918
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

periodontal ligament tissues

Cell lines:

PDLCs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TRAF6
Associated microRNA: miR-495-3p
Biological function: Aggravates LPS-induced cell injury in PDLCs: suppresses proliferation and wound healing and osteogenic differentiation; promotes apoptosis and inflammation.
Molecular mechanism: Acts as a miR-495-3p sponge to upregulate TRAF6 (ceRNA mechanism).
Biological pathway or process:

proliferation (inhibits); migration (inhibits); apoptosis (promotes); inflammation (promotes); other pathway/process (inhibits)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Clinical Sample Validation; Transfection; MTT; Wound Healing Assay; Annexin V/PI Flow Cytometry; ELISA; Western Blot; Luciferase Reporter Assay

Clinical significance:

Circ_0138959 might be a probable target for treatment of periodontitis.

Description:

Circ_0138959 is up-regulated in chronic periodontitis periodontal ligament tissues and in LPS-treated PDLCs, where it aggravates LPS-induced cell injury. Mechanistically, it sponges miR-495-3p to de-repress TRAF6, leading to reduced proliferation/wound healing/osteogenic differentiation and increased apoptosis and inflammation.

Confidence score:

0.7412

Other information
Title:

Circ_0138959/miR-495-3p/TRAF6 axis regulates proliferation, wound healing and osteoblastic differentiation of periodontal ligament cells in periodontitis.

Journal: Journal of dental sciences
Published: 2022
PubMed ID: 35784154
Study type:

combined biological and clinical study

Data availability: Supplementary data to this article can be found online at https://doi.org/10.1016/j.jds.2022.01.010.
Code availability: -