circRNA basic information
circBase ID: hsa_circ_0005320
Name: hsa_circ_SEPT9
Synonym: -
Host Gene: SEPT9
Genomic location(hg19): chr17:75398140-75398785:+
Genomic location(hg38): chr17:77402058-77402703:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tissues; paracancerous normal breast tissues / matched healthy breast tissues

Cell lines:

MCF-10A; MDA-MB-231; BT-549

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SLC1A5
Associated microRNA: miR-149-5p
Biological function: Promotes glutamine uptake and cell proliferation, inhibits apoptosis, and promotes tumor formation in breast cancer.
Molecular mechanism: Acts as a miRNA sponge for miR-149-5p to regulate SLC1A5 expression.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); other pathway/process (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; EdU Staining; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

circSEPT9 expression was significantly associated with tumor size, distant metastasis, tumor-node-metastasis (TNM) stage and HER-2 status.

Description:

circSEPT9 is up-regulated in breast cancer tissues and cell lines and promotes malignant phenotypes (glutamine uptake, proliferation, tumor growth) while inhibiting apoptosis. Mechanistically, circSEPT9 functions as a ceRNA by sponging miR-149-5p, thereby increasing SLC1A5 expression.

Confidence score:

0.8006

Other information
Title:

Knockdown of circular RNA septin 9 inhibits the malignant progression of breast cancer by reducing the expression of solute carrier family 1 member 5 in a microRNA-149-5p-dependent manner.

Journal: Bioengineered
Published: 2021
PubMed ID: 34738502
Study type:

combined biological and clinical study

Data availability: Supplemental data for this article can be accessed here.
Code availability: -