circRNA basic information
circBase ID: hsa_circ_0002570
Name: hsa_circ_FAM73A
Synonym: -
Host Gene: FAM73A
Genomic location(hg19): chr1:78267015-78280916:+
Genomic location(hg38): chr1:77801330-77815231:+
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent noncancerous tissues; tumor tissues

Cell lines:

GSE-1; AGS; MKN28; MKN45; SGC7901; HGC27; BGC23

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: VCAN
Associated microRNA: miR-587
Biological function: promotes proliferation, migration, and invasion; suppresses apoptosis; promotes tumor growth in vivo
Molecular mechanism: circ-0002570 acts as a miRNA sponge for miR-587, relieving miR-587-mediated repression of VCAN
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes); EMT (promotes)

Detected method:
Q
H
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; ISH (In Situ Hybridization); FISH / smFISH; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; TUNEL; In Vivo Animal Model; IHC (Immunohistochemistry); H&E Staining; Western Blot; Clinical Sample Validation; Cohort Study; Survival Analysis

Clinical significance:

High circ-0002570 expression is frequent in GC patients and is associated with shorter overall survival / poor prognosis.

Description:

Circ-0002570 (hsa_circ_0002570), derived from FAM73A, is up-regulated in gastric cancer tissues and cell lines and predicts poor survival. It promotes proliferation, migration, invasion, and tumor growth by sponging miR-587 to de-repress VCAN, forming a circ-0002570/miR-587/VCAN ceRNA axis.

Confidence score:

0.8847

Other information
Title:

Circular RNA Circ-0002570 Accelerates Cancer Progression by Regulating VCAN via MiR-587 in Gastric Cancer.

Journal: Frontiers in oncology
Published: 2021
PubMed ID: 34692507
Study type:

combined biological and clinical study

Data availability: GSE83521; TCGA-STAD; https://www.frontiersin.org/articles/10.3389/fonc.2021.733745/full#supplementary-material
Code availability: -