circRNA basic information
circBase ID: hsa_circ_0011385
Name: hsa_circ_EIF3I
Synonym: circ_0011385
Host Gene: EIF3I
Genomic location(hg19): chr1:32691771-32692131:+
Genomic location(hg38): chr1:32226170-32226530:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues (tumor tissues and adjacent normal tissues)

Cell lines:

SMCC-7721; Huh-7; HepG2; Hep3B; L02

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: STC2, SP3, Ago2
Associated microRNA: miR-361-3p
Biological function: Promotes proliferation and tumor growth in hepatocellular carcinoma; knockdown inhibits proliferation and colony formation in vitro and suppresses tumor-forming ability in vivo.
Molecular mechanism: Acts as a ceRNA by sponging miR-361-3p to increase STC2 expression; circ_0011385 transcription is activated by SP3.
Biological pathway or process:

proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; In Vivo Animal Model; ChIP / ChIP-seq; Western Blot; Microarray

Clinical significance:

High circ_0011385 expression was associated with tumor size, TNM stage, and poorer prognosis in HCC patients; proposed as a biomarker for diagnosis and treatment.

Description:

circ_0011385 is up-regulated in HCC and promotes HCC cell proliferation and xenograft tumor growth. Mechanistically, it functions mainly in the cytoplasm as a ceRNA sponging miR-361-3p to upregulate STC2, and its transcription is activated by SP3. High circ_0011385 expression correlates with more aggressive clinicopathologic features and poorer survival.

Confidence score:

0.8547

Other information
Title:

Hsa_circ_0011385 knockdown represses cell proliferation in hepatocellular carcinoma.

Journal: Cell death discovery
Published: 2021
PubMed ID: 34599150
Study type:

combined biological and clinical study

Data availability: GSE97332
Code availability: -