circRNA basic information
circBase ID: hsa_circ_0077607
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr6:110036280-110064975:+
Genomic location(hg38): chr6:109715077-109743772:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tissues; paracancerous tissues; tumor tissue; normal tissue

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: HJURP, OIP5, RRM2
Associated microRNA: miR-101-3p, miR-218-5p, miR-6720-3p
Biological function: unknown
Molecular mechanism: Predicted ceRNA sponge mechanism: hsa_circ_0077607 sponges miRNAs (hsa-miR-101-3p; hsa-miR-218-5p; hsa-miR-6720-3p) to indirectly regulate HJURP, OIP5 and RRM2 in LUAD.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
M
Validation methods:

Microarray; Bioinformatics Analysis

Clinical significance:

Included as an upstream regulator in a circRNA-related ceRNA network used to construct a prognostic risk score model associated with OS/DFS and immune landscape in LUAD; circRNA-specific survival association not assessed due to lack of clinical information in GEO circRNA datasets.

Description:

hsa_circ_0077607 was identified as an upregulated circRNA in LUAD and included in a prognostic ceRNA subnetwork. It is predicted to act as a miRNA sponge (miR-101-3p/miR-218-5p/miR-6720-3p) thereby indirectly affecting expression of HJURP, OIP5 and RRM2 that form a risk-score model linked to immune landscape and therapy sensitivity.

Confidence score:

0.1768

Other information
Title:

Construction of a circRNA-Related Prognostic Risk Score Model for Predicting the Immune Landscape of Lung Adenocarcinoma.

Journal: Frontiers in genetics
Published: 2021
PubMed ID: 34434213
Study type:

bioinformatics study

Data availability: GSE101684; GSE112214; TCGA; CPTAC; https://www.frontiersin.org/articles/10.3389/fgene.2021.668311/full#supplementary-material
Code availability: -