circRNA basic information
circBase ID: -
Name: hsa_circ_LRCH3
Synonym: hsa_circ_103571
Host Gene: LRCH3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0100481
MONDO name: active tuberculosis
Disease details: active tuberculosis
Disease DO ID:
-
Disease MeSH ID:
-
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: hsa‐miR‐29b‐2‐5p, hsa‐miR‐29a‐5p, hsa‐miR‐518c‐5p, hsa‐miR‐214‐3p, hsa‐miR‐16‐5p
Biological function: may regulate TB-related miRNAs and be involved in active TB pathogenesis; diagnostic biomarker potential
Molecular mechanism: predicted miRNA sponge (circRNA-miRNA-mRNA interaction) with negative correlation to miR-29a and miR-16; functional prediction by GO/KEGG enrichment
Biological pathway or process:

MAPK (other); Wnt/beta-catenin (other); autophagy (other); ceRNA regulation (other); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Bioinformatics Analysis; ROC Analysis

Clinical significance:

ROC curve analysis suggested diagnostic value for active TB (AUC 0.838) and could separate active TB patients from healthy controls

Description:

hsa_circRNA_103571 is down-regulated in plasma of active TB patients and shows diagnostic potential (AUC 0.838). The study predicts a ceRNA-like mechanism where hsa_circRNA_103571 targets TB-related miRNAs (including miR-29a and miR-16) and links to downstream mRNAs; GO/KEGG enrichment suggests association with processes such as autophagy and pathways such as Ras and regulation of actin cytoskeleton.

Confidence score:

0.5047

Other information
Title:

Dysregulated circRNAs in plasma from active tuberculosis patients.

Journal: Journal of cellular and molecular medicine
Published: 2018
PubMed ID: 29961269
Study type:

combined biological and clinical study

Data availability: GSE106953
Code availability: -