circRNA basic information
circBase ID: hsa_circ_0000620
Name: hsa_circ_AAGAB
Synonym: -
Host Gene: AAGAB
Genomic location(hg19): chr15:67524151-67529158:-
Genomic location(hg38): chr15:67231813-67236820:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; tumor tissues

Cell lines:

HGC27; AGS; GES-1; HUVECs

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MMP2, Ago2
Associated microRNA: miR-671-5p
Biological function: promotes proliferation, migration, invasion and angiogenesis; promotes tumor growth in vivo
Molecular mechanism: ceRNA mechanism: circ_0000620 sponges miR-671-5p to upregulate MMP2
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); angiogenesis (promotes); metastasis (promotes); EMT (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Tube Formation Assay; Western Blot; In Vivo Animal Model; Survival Analysis; Clinical Sample Validation

Clinical significance:

circ_0000620 could predict poor prognosis for GC patients

Description:

circ_0000620 is upregulated in gastric cancer and mainly localized in the cytoplasm. It promotes malignant phenotypes (proliferation, migration/invasion, and angiogenesis) and tumor growth by acting as a sponge for miR-671-5p, thereby increasing MMP2 expression, and high circ_0000620 is associated with poorer survival.

Confidence score:

0.8325

Other information
Title:

Circ_0000620 acts as an oncogenic factor in gastric cancer through regulating MMP2 expression via sponging miR-671-5p.

Journal: Journal of biological research (Thessalonike, Greece)
Published: 2021
PubMed ID: 34972532
Study type:

combined biological and clinical study

Data availability: The online version contains supplementary material available at 10.1186/s40709-021-00154-5; The analyzed data sets generated during the present study are available from the corresponding author on reasonable request
Code availability: -