circRNA basic information
circBase ID: hsa_circ_0008621
Name: hsa_circ_HMGCS1
Synonym: circHMGCS1-016
Host Gene: HMGCS1
Genomic location(hg19): chr5:43292575-43297268:-
Genomic location(hg38): chr5:43292473-43297166:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0003210
MONDO name: intrahepatic cholangiocarcinoma
Disease details: intrahepatic cholangiocarcinoma
Disease DO ID:
4928
Disease MeSH ID:
-
Disease NCIt ID:
C35417
Disease ICD11 ID:
1253728223; 387909164
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ICC tissues; peritumor tissues; tumor tissues; adjacent tissues; serum; peripheral blood

Cell lines:

RBE; HCCC-9810; HUCCT1; QBC939; 293 T

In vivo animal model:

cell line-derived xenograft; other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: CD73, GAL-8
Associated microRNA: miR-1236-3p
Biological function: Promotes ICC progression by enhancing proliferation, invasion and metastasis; induces immunosuppressive tumor microenvironment and anti-PD1 resistance.
Molecular mechanism: Acts as a miRNA sponge for miR-1236-3p, thereby upregulating CD73 and GAL-8 to suppress T cell proliferation/infiltration and promote immune escape and anti-PD1 resistance.
Biological pathway or process:

proliferation (promotes); invasion (promotes); metastasis (promotes); immune regulation (inhibits); ceRNA regulation (promotes); drug resistance (promotes)

Detected method:
Q
H
S
Validation methods:

circRNA-seq; RT-qPCR; ISH (In Situ Hybridization); Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; FISH / smFISH; circRIP; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; Western Blot; CCK8; Colony Formation Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); IF (Immunofluorescence); ELISA; Flow Cytometry(Non-apoptosis/cycle); Cohort Study; Survival Analysis; Bioinformatics Analysis; RNA-seq

Clinical significance:

High circHMGCS1-016 level in tumor tissues is associated with shorter survival and higher recurrence after resection; patients with high levels benefit less from anti-PD1 treatment.

Description:

circHMGCS1-016 (hsa_circ_0008621), derived from HMGCS1, is up-regulated in ICC tissues and promotes ICC cell proliferation, invasion and metastasis. Mechanistically, it sponges miR-1236-3p to increase CD73 and GAL-8, leading to an immunosuppressive microenvironment with reduced T cell activity and decreased responsiveness to anti-PD1 therapy. High circHMGCS1-016 in tumors is associated with poorer survival and higher recurrence.

Confidence score:

0.8933

Other information
Title:

circHMGCS1-016 reshapes immune environment by sponging miR-1236-3p to regulate CD73 and GAL-8 expression in intrahepatic cholangiocarcinoma.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2021
PubMed ID: 34526098
Study type:

combined biological and clinical study

Data availability: supplementary information files; available from the corresponding author upon reasonable request
Code availability: -