circRNA basic information
circBase ID: -
Name: hsa_circ_CTNNB1
Synonym: circbeta-catenin
Host Gene: beta-catenin
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005411
MONDO name: gallbladder cancer
Disease details: gallbladder cancer
Disease DO ID:
3121
Disease MeSH ID:
-
Disease NCIt ID:
C7481
Disease ICD11 ID:
922082116
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

GBC tissues; adjacent normal tissues

Cell lines:

SGC-996; NOZ; GBC-SD; OCUG-1; H69

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: STMN1
Associated microRNA: miR-223
Biological function: promotes GBC cell proliferation, cell cycle progression, tumor growth, and Warburg effect
Molecular mechanism: ceRNA sponging of miR-223 to upregulate STMN1
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); glycolysis (promotes); oxidative phosphorylation (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Nuclear-Cytoplasmic Fractionation; RNase R Treatment; FISH / smFISH; Sanger Sequencing; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Luciferase Reporter Assay; RNA Pull-Down; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Survival Analysis; Bioinformatics Analysis

Clinical significance:

circbeta-catenin expression was associated with advanced TNM stage and poor prognosis; higher expression predicted shorter overall survival and was an independent prognostic factor

Description:

circbeta-catenin is up-regulated in gallbladder cancer and mainly localizes to the cytoplasm. It promotes proliferation, cell-cycle progression, tumor growth, and the Warburg effect by sponging miR-223 to increase STMN1 expression, and high circbeta-catenin is associated with worse overall survival.

Confidence score:

0.8508

Other information
Title:

Circbeta-catenin promotes tumor growth and Warburg effect of gallbladder cancer by regulating STMN1 expression.

Journal: Cell death discovery
Published: 2021
PubMed ID: 34489401
Study type:

combined biological and clinical study

Data availability: The datasets used and/or analyzed during the current study are available from the corresponding author on reasonable request.
Code availability: -