circRNA basic information
circBase ID: hsa_circ_0008285
Name: hsa_circ_CDYL
Synonym: circCDYL
Host Gene: CDYL
Genomic location(hg19): chr6:4891946-4892613:+
Genomic location(hg38): chr6:4891712-4892379:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0006058
MONDO name: Wilms tumor
Disease details: Wilms’ tumor
Disease DO ID:
-
Disease MeSH ID:
D009396
Disease NCIt ID:
C3267
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

WT tissues; adjacent non-tumor tissues / adjacent normal tissues

Cell lines:

SK-NEP-1; G401

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: TJP1, AGO2
Associated microRNA: miR-145-5p
Biological function: Suppresses cell proliferation, migration, and invasion in Wilms’ tumor.
Molecular mechanism: Acts as a miRNA sponge for miR-145-5p, thereby upregulating TJP1 via the circCDYL/miR-145-5p/TJP1 axis.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Cell Cycle Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Increased circCDYL expression in WT had correlation with smaller tumor size and lower clinicopathologic stage; suggested as a novel biomarker and therapeutic target for WT treatment.

Description:

circCDYL is down-regulated in Wilms’ tumor and functions as a tumor suppressor. It sponges miR-145-5p to relieve repression of TJP1, thereby inhibiting WT cell proliferation, migration, and invasion, with validation in vitro and in a cell line-derived xenograft model.

Confidence score:

0.843

Other information
Title:

CircCDYL Acts as a Tumor Suppressor in Wilms' Tumor by Targeting miR-145-5p.

Journal: Frontiers in cell and developmental biology
Published: 2021
PubMed ID: 34485273
Study type:

combined biological and clinical study

Data availability: The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.
Code availability: -