circRNA basic information
circBase ID: hsa_circ_0015430
Name: hsa_circ_ABL2
Synonym: CircRNA_15430
Host Gene: abl2 / ABL2
Genomic location(hg19): chr1:179089324-179091002:-
Genomic location(hg38): chr1:179120189-179121867:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; corresponding paracancer tissues; gastritis tissues (HP+; HP-)

Cell lines:

GES-1; MGC-803; BGC-823; HGC-27; AGS; 293T; MKN28

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: ZCCHC14
Associated microRNA: miR-382-5p, miR-136-5p
Biological function: Suppresses proliferation and migration; promotes apoptosis; promotes autophagy; suppresses tumor growth in vivo; counteracts HP infection-related effects on autophagy
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-382-5p to alleviate repression of ZCCHC14
Biological pathway or process:

proliferation (inhibits); migration (inhibits); apoptosis (promotes); autophagy (promotes); EMT (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Western Blot; In Vivo Animal Model; Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

circRNA_15430 expression is negatively correlated with tumor size; no significant correlation with OS and PFS

Description:

circRNA_15430 (from ABL2) is down-regulated in gastric cancer and reduced by H. pylori infection. It mainly localizes to the cytoplasm and suppresses GC cell proliferation/migration while promoting apoptosis and autophagy, partly by acting as a ceRNA that sponges miR-382-5p to modulate ZCCHC14. In xenograft models, circRNA_15430 knockdown enhances tumor growth.

Confidence score:

0.8429

Other information
Title:

CircRNA_15430 reduced by Helicobacter pylori infection and suppressed gastric cancer progression via miR-382-5p/ZCCHC14 axis.

Journal: Biology direct
Published: 2023
PubMed ID: 37626393
Study type:

combined biological and clinical study

Data availability: GSE100170; GSE152309; GSE163416; GSE131414; 10.1186/s13062-023-00402-9
Code availability: -