circRNA basic information
circBase ID: hsa_circ_0005480
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr4:151023629-151023964:+
Genomic location(hg38): chr4:150102477-150102812:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
 684, 686
Disease MeSH ID:
 D006528
Disease NCIt ID:
 C3099
Disease ICD11 ID:
 1294035808
Disease OMIM ID:
 114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC samples; adjacent non-cancerous tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: unknown
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation
Clinical significance:

upregulated in HCC
Description:

hsa_circ_0005480 is experimentally validated by RT-qPCR to be up-regulated in HCC tissues compared with adjacent non-cancerous tissues; no further functional or mechanistic validation is reported for this circRNA in the study.
Confidence score:

0.2995
Other information
Title:

Comprehensive analysis of TGF-beta-induced mRNAs and ncRNAs in hepatocellular carcinoma.

Journal: Aging
Published: 2020
PubMed ID: 33012723
Study type:

combined biological and clinical study
Data availability: -
Code availability: -