circRNA basic information
circBase ID: hsa_circ_0001016
Name: hsa_circ_XPO1
Synonym: circXPO1
Host Gene: XPO1
Genomic location(hg19): chr2:61749745-61753656:-
Genomic location(hg38): chr2:61522610-61526521:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tumor tissues; adjacent non-tumor lung tissues

Cell lines:

A549; SPC-A1; NCI-H460; NCI-H2126; NCI-H1703; NCI-H1299; 16-HBE

In vivo animal model:

patient-derived xenograft; cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: IGF2BP1, CTNNB1
Associated microRNA: -
Biological function: promotes proliferation and migration/invasion; inhibits apoptosis; promotes tumor growth in vivo
Molecular mechanism: circXPO1 binds IGF2BP1 and enhances CTNNB1 mRNA stability, increasing CTNNB1 expression and promoting LUAD progression; circXPO1 overexpression is positively correlated with XPO1 gene copy number gain.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); Wnt/beta-catenin (promotes); mRNA stability (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; RIP (RNA Immunoprecipitation); Actinomycin D / DRB Stability Assay; Transfection; MTT; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; TUNEL; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Clinical Sample Validation; Cohort Study; Survival Analysis

Clinical significance:

circXPO1 was overexpressed in LUAD tumor tissues and high circXPO1 expression was associated with shorter overall survival times; suggested as a biomarker for poor survival and a therapeutic target.

Description:

circXPO1 (hsa_circ_0001016), derived from XPO1 exon 3-4, is upregulated in LUAD and correlates with worse overall survival. It predominantly localizes in the cytoplasm, binds the RBP IGF2BP1, enhances CTNNB1 mRNA stability and CTNNB1 protein expression, thereby promoting LUAD cell proliferation and migration/invasion and tumor growth; circXPO1 knockdown suppresses growth in xenograft and PDX models.

Confidence score:

0.8783

Other information
Title:

A novel circular RNA, circXPO1, promotes lung adenocarcinoma progression by interacting with IGF2BP1.

Journal: Cell death & disease
Published: 2020
PubMed ID: 33268793
Study type:

combined biological and clinical study

Data availability: Supplementary Information accompanies this paper at (10.1038/s41419-020-03237-8).
Code availability: -