circRNA basic information
circBase ID: hsa_circ_0001821
Name: hsa_circ_PVT1
Synonym: circ3823
Host Gene: PVT1
Genomic location(hg19): chr8:128902834-128903244:+
Genomic location(hg38): chr8:127890588-127890998:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; para-cancerous tissues; serum; paraffin-embedded tissue sections

Cell lines:

HCT116; HT29; SW480; DLD-1; FHC; 293 T; HUVEC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TCF7, MYC, CCND1, AGO2, YTHDF3, ALKBH5, YTHDF2
Associated microRNA: miR-30c-5p
Biological function: promotes CRC cell proliferation, metastasis and angiogenesis; inhibits apoptosis
Molecular mechanism: ceRNA sponge of miR-30c-5p to de-repress TCF7, increasing MYC and CCND1; m6A modification related to circ3823 degradation
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); angiogenesis (promotes); apoptosis (inhibits); Wnt/beta-catenin (promotes); ceRNA regulation (promotes); m6A modification (other)

Detected method:
Q
H
S
Validation methods:

RNA-seq; RT-qPCR; ISH (In Situ Hybridization); Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; CCK8; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Tube Formation Assay; Western Blot; IF (Immunofluorescence); IHC (Immunohistochemistry); H&E Staining; In Vivo Animal Model; Survival Analysis; ROC Analysis; Bioinformatics Analysis; MeRIP / MeRIP-seq; Cohort Study; Clinical Sample Validation

Clinical significance:

high circ3823 expression predicted a worse prognosis of CRC patients; serum circ3823 showed high sensitivity and specificity for detecting CRC (potential diagnostic biomarker)

Description:

circ3823 (hsa_circ_0001821), derived from PVT1, is up-regulated in CRC tissues and patient serum and is associated with worse prognosis and diagnostic potential. It promotes CRC proliferation, migration/invasion, metastasis and angiogenesis by sponging miR-30c-5p to increase TCF7, thereby upregulating MYC and CCND1 and activating Wnt signaling. The study also reports m6A modification on circ3823 linked to its degradation regulation.

Confidence score:

0.9043

Other information
Title:

Circ3823 contributes to growth, metastasis and angiogenesis of colorectal cancer: involvement of miR-30c-5p/TCF7 axis.

Journal: Molecular cancer
Published: 2021
PubMed ID: 34172072
Study type:

combined biological and clinical study

Data availability: available from the corresponding authors on reasonable request
Code availability: -