circRNA basic information
circBase ID: hsa_circ_0069244
Name: hsa_circ_LDB2
Synonym: circLDB2
Host Gene: LDB2
Genomic location(hg19): chr4:16587544-16760883:-
Genomic location(hg38): chr4:16585921-16759260:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-squamous non-small cell lung cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary lung tumors; adjacent normal lung tissues

Cell lines:

A549; H23; H460; 16HBE; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: LIMCH1, p53, PUMA, Ago2
Associated microRNA: miR-346
Biological function: Suppresses cell proliferation, migration and invasion; promotes apoptosis; enhances cisplatin sensitivity; promotes the antitumor effect of cisplatin in vivo.
Molecular mechanism: Acts as a ceRNA to sponge miR-346, thereby inducing LIMCH1 expression and affecting downstream p53/PUMA levels.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (inhibits); migration (inhibits); invasion (inhibits); apoptosis (promotes); chemoresistance (inhibits); p53 signaling (promotes)

Detected method:
Q
M
Validation methods:

Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Clinical Sample Validation; Microarray

Clinical significance:

circLDB2 expression was associated with tumor, node, and metastasis (TNM) stage and lymph node metastasis.

Description:

circLDB2 is down-regulated in non-squamous NSCLC and functions as a cytoplasmic ceRNA that sponges miR-346 to increase LIMCH1 expression, thereby inhibiting malignant phenotypes and improving cisplatin sensitivity (with increased p53/PUMA).

Confidence score:

0.8546

Other information
Title:

Circular RNA circLDB2 functions as a competing endogenous RNA to suppress development and promote cisplatin sensitivity in non-squamous non-small cell lung cancer.

Journal: Thoracic cancer
Published: 2021
PubMed ID: 34096174
Study type:

combined biological and clinical study

Data availability: GSE112214; GSE108214
Code availability: -