circRNA basic information
circBase ID: hsa_circ_0001554
Name: hsa_circ_RANBP17
Synonym: circRANBP17
Host Gene: RANBP17
Genomic location(hg19): chr5:170305100-170323119:+
Genomic location(hg38): chr5:170878096-170896115:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0015459
MONDO name: nasopharyngeal carcinoma
Disease details: nasopharyngeal carcinoma
Disease DO ID:
9261
Disease MeSH ID:
D00007727; D000077274
Disease NCIt ID:
C3871
Disease ICD11 ID:
1883313543
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NPC tissues; normal nasopharyngeal epithelial tissues

Cell lines:

SNU46; SUNE1; CNE-1; HONE-1; CNE-2; HNE-1; 6‐10B; NP-69

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RUNX2
Associated microRNA: miR-635
Biological function: Promotes NPC cell proliferation, invasion, and tumor growth.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-635 to increase RUNX2 expression, promoting NPC progression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); invasion (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Actinomycin D / DRB Stability Assay; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; CCK8; Colony Formation Assay; Transwell Assay; Luciferase Reporter Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); FISH / smFISH; Transfection; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model

Clinical significance:

May serve as a potential therapeutic target for NPC.

Description:

hsa_circ_0001554 (circRANBP17), derived from RANBP17, is up-regulated in nasopharyngeal carcinoma tissues and cell lines. It promotes NPC cell proliferation and invasion and enhances tumor growth by sponging miR-635 to increase RUNX2 expression (circRANBP17/miR-635/RUNX2 ceRNA axis).

Confidence score:

0.8382

Other information
Title:

Overexpressed circRANBP17 acts as an oncogene to facilitate nasopharyngeal carcinoma via the miR-635/RUNX2 axis.

Journal: Journal of Cancer
Published: 2021
PubMed ID: 34093832
Study type:

combined biological and clinical study

Data availability: GSE143797; TCGA
Code availability: -