circRNA basic information
circBase ID: hsa_circ_0001666
Name: hsa_circ_FAM120B
Synonym: circ_0001666
Host Gene: FAM120B
Genomic location(hg19): chr6:170626457-170639638:+
Genomic location(hg38): chr6:170317369-170330550:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009831
MONDO name: malignant pancreatic neoplasm
Disease details: Pancreatic cancer
Disease DO ID:
1793
Disease MeSH ID:
-
Disease NCIt ID:
C9005
Disease ICD11 ID:
542147910
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PC tissues; adjacent non-cancerous tissues

Cell lines:

AsPC-1; PANC-1; SW-1990; PaCa-2; HPDE6-C7

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: SOX4, EZH2, Ago2
Associated microRNA: miR-1251
Biological function: Promotes PC cell proliferation, EMT, invasiveness and tumor growth; knockdown inhibits these phenotypes.
Molecular mechanism: Acts as a competing endogenous RNA (miRNA sponge) for miR-1251, leading to increased SOX4 (and EZH2) and promoting EMT/invasion.
Biological pathway or process:

EMT (promotes); invasion (promotes); proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Transwell Assay; Western Blot; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Clinical Sample Validation; Cohort Study; Survival Analysis; In Vivo Animal Model

Clinical significance:

High circ_0001666 expression is associated with lymph node metastasis and shorter overall survival/poor prognosis in PC patients.

Description:

circ_0001666 is up-regulated in pancreatic cancer and promotes proliferation, EMT and invasion. Mechanistically, it functions as a miR-1251 sponge to de-repress SOX4 (and increase EZH2), and high circ_0001666 expression is associated with poorer overall survival.

Confidence score:

0.8219

Other information
Title:

Silencing of circRNA circ_0001666 Represses EMT in Pancreatic Cancer Through Upregulating miR-1251 and Downregulating SOX4.

Journal: Frontiers in molecular biosciences
Published: 2021
PubMed ID: 34055896
Study type:

combined biological and clinical study

Data availability: -
Code availability: -