circRNA basic information
circBase ID: -
Name: hsa_circ_HMGCS1
Synonym: -
Host Gene: HMGCS1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
 684, 686
Disease MeSH ID:
 D006528
Disease NCIt ID:
 C3099
Disease ICD11 ID:
 1294035808
Disease OMIM ID:
 114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; adjacent non-tumor tissues
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Clinical Sample Validation
Clinical significance:

-
Description:

circHMGCS1 is significantly down-regulated in HCC tumor tissues compared with paired adjacent non-tumor tissues, supported by RNA-seq and RT-qPCR validation in 21 patient pairs.
Confidence score:

0.3588
Other information
Title:

Analyses of a Panel of Transcripts Identified From a Small Sample Size and Construction of RNA Networks in Hepatocellular Carcinoma.

Journal: Frontiers in genetics
Published: 2019
PubMed ID: 31156698
Study type:

combined biological and clinical study
Data availability: GSE128274
Code availability: -