circRNA basic information
circBase ID: -
Name: hsa_circ_SETDB1
Synonym: -
Host Gene: SETDB1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

serum; serum exosomes; tumor tissues; adjacent normal tissues

Cell lines:

A549; PC-9; 293T; H1975; H1395; SPC-A1; H441; BEAS-2B

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: Sp1, Ago2
Associated microRNA: miR-7
Biological function: promotes proliferation; promotes migration; promotes invasion; promotes EMT; promotes tumor growth and metastasis
Molecular mechanism: exosomal circSETDB1 functions as a miRNA sponge for miR-7, thereby upregulating Sp1 and promoting EMT and malignant phenotypes in LUAD
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); ceRNA regulation (promotes); metastasis (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; FISH / smFISH; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Western Blot; IF (Immunofluorescence); IHC (Immunohistochemistry); In Vivo Animal Model; H&E Staining; Bioinformatics Analysis; ROC Analysis; Clinical Sample Validation

Clinical significance:

exosomal circSETDB1 was upregulated in serum exosomes in LUAD patients and associated with disease stage / T stage and lymph node metastasis; ROC AUC=0.601 for LUAD diagnosis

Description:

In LUAD, exosomal circSETDB1 is upregulated under hypoxia and in patient serum exosomes. It promotes proliferation, migration, invasion and EMT by sponging miR-7 to upregulate Sp1, enhancing tumor growth and metastasis.

Confidence score:

0.8871

Other information
Title:

Hypoxic tumor-derived exosomal circular RNA SETDB1 promotes invasive growth and EMT via the miR-7/Sp1 axis in lung adenocarcinoma.

Journal: Molecular therapy. Nucleic acids
Published: 2021
PubMed ID: 33614250
Study type:

combined biological and clinical study

Data availability: GEO: GSE144053
Code availability: -