circRNA basic information
circBase ID: hsa_circ_0017639
Name: hsa_circ_SFMBT2
Synonym: hsa_circRNA_100542
Host Gene: SFMBT2
Genomic location(hg19): chr10:7290509-7327916:-
Genomic location(hg38): chr10:7248547-7285954:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
 684, 686
Disease MeSH ID:
 D006528
Disease NCIt ID:
 C3099
Disease ICD11 ID:
 1294035808
Disease OMIM ID:
 114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

-
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
M
Validation methods:

Microarray
Clinical significance:

-
Description:

hsa_circRNA_100542 (hsa_circ_0017639, SFMBT2) was identified as up-regulated in HCC by GEO circRNA microarray meta-analysis, but was not detectable in the authors' in-house clinical samples and was not included in downstream network analyses.
Confidence score:

0.1155
Other information
Title:

A circRNA-miRNA-mRNA network identification for exploring underlying pathogenesis and therapy strategy of hepatocellular carcinoma.

Journal: Journal of translational medicine
Published: 2018
PubMed ID: 30092792
Study type:

bioinformatics study
Data availability: GSE78520; GSE94508; GSE97332
Code availability: -