circRNA basic information
circBase ID: hsa_circ_0000826
Name: hsa_circ_ATP2B1
Synonym: circATP2B1
Host Gene: ATP2B1
Genomic location(hg19): chr18:9182379-9221997:+
Genomic location(hg38): chr18:9182381-9221999:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

normal gastric tissues (GT); gastric adenocarcinoma cancer specimens (HDAC); gastric adenocarcinoma cancer specimens (PDAC)

Cell lines:

MKN45; SGC7901; GES-1; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PKM2, Ago2, RISC
Associated microRNA: miR-326-3p, miR-330-5p
Biological function: promotes aerobic glycolysis and proliferation (increases cell viability, glucose uptake and lactate production) in gastric cancer cells
Molecular mechanism: circATP2B1 acts as a ceRNA/miRNA sponge for the miR-326 gene cluster (miR-326-3p and miR-330-5p) in an Ago2/RISC-dependent manner, relieving repression of PKM2 and promoting aerobic glycolysis
Biological pathway or process:

glycolysis (promotes); proliferation (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; RT-qPCR; FISH / smFISH; Actinomycin D / DRB Stability Assay; Transfection; CCK8; EdU Staining; Western Blot; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); In Vivo Animal Model; IHC (Immunohistochemistry); Survival Analysis; Clinical Sample Validation

Clinical significance:

patients who had higher circATP2B1 expression had a poorer prognosis; progression free survival and overall survival were shorter in the higher circATP2B1 group

Description:

circATP2B1 is up-regulated in gastric cancer tissues and cell lines and mainly localizes to the cytoplasm. It promotes aerobic glycolysis and proliferation by sponging miR-326-3p/miR-330-5p (miR-326 gene cluster) in an Ago2/RISC-dependent manner, thereby relieving repression of PKM2.

Confidence score:

0.8606

Other information
Title:

circATP2B1 Promotes Aerobic Glycolysis in Gastric Cancer Cells Through Regulation of the miR-326 Gene Cluster.

Journal: Frontiers in oncology
Published: 2021
PubMed ID: 33996547
Study type:

combined biological and clinical study

Data availability: https://www.frontiersin.org/articles/10.3389/fonc.2021.628624/full#supplementary-material
Code availability: -