circRNA basic information
circBase ID: hsa_circ_0010220
Name: hsa_circ_ARHGEF10L
Synonym: circ_0010220
Host Gene: ARHGEF10L
Genomic location(hg19): chr1:17907047-18024370:+
Genomic location(hg38): chr1:17580552-17697875:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

osteosarcoma tumor tissues; adjacent normal tissues; xenograft tumor tissues

Cell lines:

HOS; U2OS; hFOB 1.19

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: STX6 / Syntaxin 6, Ago2
Associated microRNA: miR-198
Biological function: Promotes osteosarcoma progression by enhancing proliferation, migration and invasion, facilitating cell cycle progression, and inhibiting apoptosis; supports xenograft tumor growth.
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-198 to upregulate STX6 (Syntaxin 6).
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); cell cycle (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Cohort Study; Survival Analysis; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; In Vivo Animal Model; Western Blot; IHC (Immunohistochemistry)

Clinical significance:

High circ_0010220 expression is associated with lower survival rate (poor overall survival) in osteosarcoma patients.

Description:

circ_0010220 (from ARHGEF10L) is up-regulated in osteosarcoma tissues/cells and its high expression is linked to poorer survival. Functionally, circ_0010220 promotes malignant phenotypes and xenograft growth by sponging miR-198 to derepress STX6, forming a circ_0010220/miR-198/STX6 ceRNA axis.

Confidence score:

0.8621

Other information
Title:

Hsa_circ_0010220 regulates miR-198/Syntaxin 6 axis to promote osteosarcoma progression.

Journal: Journal of bone oncology
Published: 2021
PubMed ID: 33996428
Study type:

combined biological and clinical study

Data availability: GSE140256; https://doi.org/10.1016/j.jbo.2021.100360
Code availability: -