circRNA basic information
circBase ID: -
Name: hsa_circ_UBAP2
Synonym: circRNA_104765
Host Gene: UBAP2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004781
MONDO name: acute myocardial infarction
Disease details: Acute myocardial infarction
Disease DO ID:
9408
Disease MeSH ID:
-
Disease NCIt ID:
C35204
Disease ICD11 ID:
1334938734
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

whole blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: hsa-miR-532-5p, hsa-miR-496, hsa-miR-767-5p, hsa-miR-589-5p, hsa-miR-188-3p
Biological function: potential biomarker for AMI diagnosis
Molecular mechanism: bioinformatically predicted circRNA-miRNA interactions
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; RNase R Treatment; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

-

Description:

circRNA_104765 (host gene UBAP2) was identified by microarray and validated by RT-qPCR as down-regulated in whole blood of AMI patients versus mild coronary artery stenosis controls. It was proposed as a potential AMI biomarker, with predicted miRNA binding partners from TargetScan/miRanda.

Confidence score:

0.5135

Other information
Title:

Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression.

Journal: Frontiers in genetics
Published: 2021
PubMed ID: 33995502
Study type:

combined biological and clinical study

Data availability: GSE169594
Code availability: -