circRNA basic information
circBase ID: -
Name: hsa_circ_PTPRA
Synonym: circRNA_PTPRA
Host Gene: PTPRA
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

Huh-7; HCCLM3; THLE-2; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: AGO2
Associated microRNA: miR-582-3p
Biological function: promotes proliferation, migration and invasion; inhibits apoptosis in HCC cells
Molecular mechanism: Acts as a sponge for miR-582-3p, negatively regulating miR-582-3p and affecting downstream proliferation/metastasis and apoptosis markers (cyclin D1, MMP-9, Bcl-2, Bax).
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; MTT; Annexin V/PI Flow Cytometry; Transwell Assay; Western Blot; Bioinformatics Analysis

Clinical significance:

circRNA_PTPRA/miR-582-3p axis may represent a potential target for HCC diagnosis and treatment.

Description:

circRNA_PTPRA is upregulated in HCC cell lines and promotes malignant phenotypes by sponging miR-582-3p. Silencing circRNA_PTPRA increases miR-582-3p and suppresses proliferation, migration and invasion while promoting apoptosis, with rescue by miR-582-3p inhibition.

Confidence score:

0.6253

Other information
Title:

circRNA_PTPRA functions as a sponge of miR-582-3p to regulate hepatocellular carcinoma cell proliferation, migration, invasion and apoptosis.

Journal: Experimental and therapeutic medicine
Published: 2021
PubMed ID: 34594413
Study type:

biological research

Data availability: available from the corresponding author upon reasonable request
Code availability: -