circRNA basic information
circBase ID: hsa_circ_0004771
Name: hsa_circ_NRIP1
Synonym: circ_0004771
Host Gene: NRIP1
Genomic location(hg19): chr21:16386664-16415895:-
Genomic location(hg38): chr21:15014343-15043574:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; GC tissues; paracancerous tissues

Cell lines:

HGC-27; BGC-823; MKN-1; MKN-45; GES-1; SGC-7901

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: NRIP1
Associated microRNA: miR-4298, miR-339-5p, miR-4687-3p, miR-548, miR-148p-5p, miR-3921, miR-7974, miR-1267, miR-1200, miR-4277
Biological function: Acts as a diagnostic and dynamic monitoring biomarker for gastric cancer; may be released into blood by GC cells and potentially regulate GC progression.
Molecular mechanism: Predicted ceRNA (circRNA-miRNA-mRNA) regulatory network; mechanism not experimentally confirmed.
Biological pathway or process:

ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

circRNA-seq; RNase R Treatment; Sanger Sequencing; RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Actinomycin D / DRB Stability Assay; Bioinformatics Analysis; ROC Analysis

Clinical significance:

Plasma circ_0004771 distinguishes GC patients from healthy donors and gastritis patients (AUC=0.831 and 0.845), decreases to normal after surgery, and increases again in postoperative recurrence, supporting use as a diagnostic and dynamic monitoring biomarker.

Description:

This study identifies plasma circ_0004771 (NRIP1-derived) as up-regulated in gastric cancer and demonstrates its value as a noninvasive diagnostic biomarker with good ROC performance. Its plasma level decreases after gastrectomy and increases again upon recurrence, supporting dynamic monitoring utility; a cytoplasmic ceRNA network with multiple predicted miRNAs is proposed but not experimentally validated.

Confidence score:

0.6957

Other information
Title:

Comprehensive Assessment of Plasma Circ_0004771 as a Novel Diagnostic and Dynamic Monitoring Biomarker in Gastric Cancer.

Journal: OncoTargets and therapy
Published: 2020
PubMed ID: 33116589
Study type:

combined biological and clinical study

Data availability: GSE131414
Code availability: -