circRNA basic information
circBase ID: hsa_circ_0072309
Name: hsa_circ_LIFR
Synonym: circLIFR
Host Gene: LIFR
Genomic location(hg19): chr5:38523520-38530768:-
Genomic location(hg38): chr5:38523418-38530666:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung carcinoma
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

lung adenocarcinoma tissues; adjacent normal tissues

Cell lines:

H1975; H1650; HBE; A549; HEK293

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: FTO, AGO2
Associated microRNA: miR-607
Biological function: promotes proliferation, migration, invasion, and tumor growth in NSCLC
Molecular mechanism: Acts as a miR-607 sponge via MRE to upregulate the miR-607 target FTO.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); ceRNA regulation (promotes); m6A modification (other)

Detected method:
Q
H
M
Validation methods:

Microarray; RNase R Treatment; RT-qPCR; divergent primers PCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; ISH (In Situ Hybridization); RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; MTT; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

potential diagnostic and therapeutic marker / potential biomarker for NSCLC

Description:

hsa_circ_0072309 (circLIFR), derived from LIFR, is upregulated in NSCLC/LUAD and mainly localizes to the cytoplasm. It promotes proliferation, migration, invasion and xenograft tumor growth by sponging miR-607 and thereby upregulating the miR-607 target FTO (an m6A demethylase), establishing a hsa_circ_0072309/miR-607/FTO oncogenic axis.

Confidence score:

0.867

Other information
Title:

Circular RNA hsa_circ_0072309 promotes tumorigenesis and invasion by regulating the miR-607/FTO axis in non-small cell lung carcinoma.

Journal: Aging
Published: 2021
PubMed ID: 33879631
Study type:

combined biological and clinical study

Data availability: -
Code availability: -