circRNA basic information
circBase ID: hsa_circ_0072309
Name: hsa_circ_LIFR
Synonym: circLIFR
Host Gene: LIFR
Genomic location(hg19): chr5:38523520-38530768:-
Genomic location(hg38): chr5:38523418-38530666:-
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004986
MONDO name: urinary bladder carcinoma
Disease details: bladder cancer
Disease DO ID:
4007
Disease MeSH ID:
-
Disease NCIt ID:
C4912
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

bladder cancer tissues; paired adjacent normal bladder tissues

Cell lines:

T24; UMUC3; SV-HUC-1; UROtsa; T24-CDDP

In vivo animal model:

cell line-derived xenograft; patient-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: MSH2, MSH6, ATM, MutSalpha, p73
Associated microRNA: -
Biological function: Promotes apoptosis; increases sensitivity to cisplatin (CDDP); attenuates chemoresistance; suppresses tumor growth in vivo
Molecular mechanism: circLIFR binds MSH2 in the nucleus, enhances MutSalpha-ATM interaction, increases ATM phosphorylation, stabilizes/upregulates p73, leading to apoptosis and enhanced cisplatin sensitivity
Biological pathway or process:

apoptosis (promotes); drug resistance (inhibits); other pathway/process (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Clinical Sample Validation; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RNA Pull-Down; RIP (RNA Immunoprecipitation); Co-IP; Western Blot; Transfection; CCK8; Annexin V/PI Flow Cytometry; In Vivo Animal Model; IHC (Immunohistochemistry); TUNEL; Survival Analysis; Bioinformatics Analysis

Clinical significance:

CircLIFR expression was positively correlated with favorable prognosis; circLIFR and MSH2 status might be used as a stratification biomarker to select bladder cancer patients who may respond and benefit from CDDP treatment.

Description:

CircLIFR (hsa_circ_0072309), derived from LIFR, is down-regulated in bladder cancer and higher expression is associated with better overall survival. It localizes mainly in the nucleus and binds MSH2, enhancing MutSalpha-ATM interaction and ATM phosphorylation to increase p73-mediated apoptosis, thereby sensitizing bladder cancer cells and xenografts/PDX tumors to cisplatin and reducing chemoresistance.

Confidence score:

0.8931

Other information
Title:

CircLIFR synergizes with MSH2 to attenuate chemoresistance via MutSalpha/ATM-p73 axis in bladder cancer.

Journal: Molecular cancer
Published: 2021
PubMed ID: 33874956
Study type:

combined biological and clinical study

Data availability: -
Code availability: -