circRNA basic information
circBase ID: hsa_circ_0000566
Name: hsa_circ_VRK1
Synonym: circVRK1
Host Gene: VRK1
Genomic location(hg19): chr14:97299803-97327072:+
Genomic location(hg38): chr14:96833466-96860735:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005081
MONDO name: preeclampsia
Disease details: pre-eclampsia
Disease DO ID:
10591
Disease MeSH ID:
D011225
Disease NCIt ID:
C85021
Disease ICD11 ID:
229121159
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

placenta tissues / placental tissues

Cell lines:

HTR-8/SVneo; 293T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: PTEN, Akt
Associated microRNA: miR-221-3p
Biological function: Suppresses trophoblast cell migration, invasion and EMT (circVRK1 knockdown promotes these phenotypes), contributing to PE progression.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-221-3p to regulate PTEN and thereby modulate Akt phosphorylation (PI3K/Akt signaling).
Biological pathway or process:

migration (inhibits); invasion (inhibits); EMT (inhibits); PI3K/AKT (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Sanger Sequencing; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; FISH / smFISH; RNA Pull-Down; circRNA-seq; Luciferase Reporter Assay; Transfection; Transwell Assay; Wound Healing Assay; IF (Immunofluorescence); Western Blot; Clinical Sample Validation

Clinical significance:

circVRK1 serves as a potential biomarker for the diagnosis of PE.

Description:

circVRK1 (hsa_circ_0000566), derived from VRK1, is up-regulated in pre-eclampsia placental tissues. It localizes mainly in the cytoplasm and suppresses trophoblast migration, invasion and EMT by sponging miR-221-3p to derepress PTEN and reduce Akt phosphorylation/PI3K-Akt activation.

Confidence score:

0.8405

Other information
Title:

Circular RNA VRK1 facilitates pre-eclampsia progression via sponging miR-221-3P to regulate PTEN/Akt.

Journal: Journal of cellular and molecular medicine
Published: 2022
PubMed ID: 33738906
Study type:

combined biological and clinical study

Data availability: GSE137854
Code availability: -